Speed Tier List (Chunin Edition)

Rankings

1. Kuro Blackshadow (78)
2. Vix Raiu (75, 85 when fully enraged)
3. Eiken Shinzo (75)
4. D (68)
5. Jin Hyuga (63)
6. Chosuke-Chosuke Kirabokua (62)
7. Rinka Akagi (58)
8. Fujiwara Nobutake (52)
9. Ankan Bidatsu (44)
10. Kichōna (42.5, 52.5 when fully enraged)
11. Akaito Tenyo (41)
12. Kazen Uzumaki (31)
13. Kitsumoto Hachirō (31)
14. Ghidorah (27)
15. Masukuda Rarime, Shinrō Kamotai (25)
16. Tahaki Shiteru (21)
17. Remilia Orochimaru (15)
18. Ichika Chinoike (9)
19. Shichirou Hyūga (4)
20. Yuma Kouda, Sen Yamamoto (0)

Factors

Deep Reserves, Skilled, Talented, Gifted, Prodigious, and Enhanced Body are worth 5
Rage is worth 10, but only when fully enraged, so it doesn't count for the tier list
Yang, Lightning, and Wind natures
Unarmed Combat
Body Flicker
Weapon Art
Chakra Flow
Substance Production: Myocardium is worth half
Advanced Taijutsu
Advanced Fighting Styles and Advanced Weapon Style that boost speed: Flashing Fist, Striking Iron Style, Howling Mountain Style
Chakra Mode
Muscle Enhancement
Man-Beast Transformation
Chakra Threads (custom)
Lightning and Wind Spears
Weight Control
Hazy Hell Gate is worth double
Eight Gates Technique and Seven Heavenly Breaths Technique are worth double
{Elemental} Chakra Cloak
Flying Thunder God is worth double
Sage Mode
Angel Mode
Typhoon
Swift is worth 20
Machina Ex and Natural Demon are worth half

The cyoa is very ambiguous. Trying to figure out what exactly gives more than another and by how much would be hell. Counting points is just the simplest solution; it's good enough to get a good gauge at the approximate speed of builds.

Builds

Kuro Blackshadow (78)

Prodigious
Skilled
Talented
Yang
Lightning
Wind
Unarmed Combat
Body Flicker
Chakra Flow
Weapon Art
Advanced Taijutsu
Advanced Fighting Style (Flashing Shade Fist)++
Advanced Weapon Style (Howling Mountain of Darkness)++
Chakra Mode
Swift

Vix Raiu (75, 85 when fully enraged)

Deep Reserves
Talented
Enhanced Body
Rage
Lightning
Unarmed Combat 1
Body Flicker 3
Weapon Art 3
Chakra Flow 1
Advanced Taijutsu 3
Advanced Weapon Art 3 (Striking Iron Style)
Chakra Mode 3
Natural Demon

Eiken Shinzo (75)

Deep Reserves
Talented
Enhanced Body
Yang
Unarmed Combat x3
Chakra Flow x2
Advanced Taijutsu x3
Chakra Mode x3
Earth Chakra Cloak (mastery)
Sage Mode

D (68)

Skilled
Gifted
Talented
Lightning
Body Flicker++
Weapon Art++
Chakra Flow+
Advanced Taijutsu++
Advanced Weapon Style (Striking Iron Style)++
Chakra Mode
Elemental Chakra Cloak

Jin Hyuga (63)

Talented
Yang
Lightning
Unarmed Combat 3
Chakra Flow 3
Body Flicker 2
Advanced Taijutsu 3
Seven Heavenly Breaths Technique 2

Chosuke-Chosuke Kirabokua (62)

Deep Reserves
Yang
Wind
Weapon Art++
Chakra Flow+
Advanced Taijutsu++
Chakra Mode++
Swift

Rinka Akagi (58)

Deep Reserves
Enhanced Body
Yang
Unarmed Combat++
Body Flicker+
Chakra Flow++
Advanced Taijutsu++
Angel Mode

Fujiwara Nobutake (52)

Skilled
Yang
Wind
Weapon Art 3: Archery/Kyujutsu
Chakra Flow 3
Weapon Art 3: Swordsmanship/Kenjutsu
Unarmed Combat 2
Advanced Taijutsu 1
Advanced Weapon Style 3: Striking Iron Style
Advanced Weapon Style 1: Howling Mountain Style

Ankan Bidatsu (44)

Unarmed Combat
Chakra Flow
Sage Mode
Enlightened Sage Mode

Kichōna (42.5, 52.5 when fully enraged)

Rage
Yang
Lightning
Unarmed Combat (Upgrade)
Weapon Art (Upgrade)
Body Flicker (Upgrade x2)
Chakra Flow (Upgrade x2)
Substance Production: Myocardium (Upgrade x2)
Machina Ex

Akaito Tenyo (41)

Skilled
Talented
Wind
Weapon Art++
Chakra Flow++
Advanced Taijutsu
Chakra Threads (custom)++

Kazen Uzumaki (31)

Yang
Unarmed Combat+
Weapon Art++
Chakra Flow
Advanced Taijutsu++
Hazy Hell Gate

Kitsumoto Hachirō (31)

Gifted
Body Flicker
Weapon Art: Great Kusarigama+
Chakra Flow+
Advanced Taijutsu++
Chakra Mode+

Ghidorah (27)

Talented
Gifted
Prodigious
Weapon Art+
Chakra Flow+
Body Flicker+

Masukuda Rarime (25)

Deep Reserves
Gifted
Talented
Lightning
Weapon Art+
Chakra Flow

Shinrō Kamotai (25)

Deep Reserves
Talented
Wind
Body Flicker++
Chakra Flow+

Tahaki Shiteru (21)

Deep Reserves
Yang
Body Flicker 3
Weapon Art
Chakra Flow 2

Remilia Orochimaru (15)

Talented
Wind
Unarmed Combat
Body Flicker
Chakra Flow

Ichika Chinoike (9)

Yang
Body Flicker
Chakra Flow+

Shichirou Hyūga (4)

Unarmed Combat
Chakra Flow

Yuma Kouda (0)

Sen Yamamoto (0)